Protein Model on 7lbw_A_1_F_1
(TEMPLATE: 
7lbw
)Protein Model on 7lbw_A_1_F_1
(TEMPLATE: 7lbw
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [193 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | F 1 (F) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'-D(P*TP*AP*GP*CP*CP*TP*TP*TP*CP*TP*AP*TP*TP*AP*GP*CP*TP*CP*TP*TP*AP*G)-3') | 87K 96K 97R 99P(R) 103F(N) 106C(V) 107S(A) 110R(F) 111P(Q) 118P 123G(Q) 126A(L) (identity: 33.3 %/28.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7lbw_A_1 identity=28.6% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85
:**** *** * * *** * ** * * * * * * * *:
7lbw_A_1 8:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 102
SecStr : --- HHHHHHHHHHHHHHHH SSS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeee---eebeeebbeebbeebeeeeeebee--eebeeebbeebeebeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeeeeeeeeeeeeeee:
queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK----GKPDAAKKGV: 175
:*** **** ** * ** * * * * * * * * * * * :
7lbw_A_1 103:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTI: 193
SecStr :HHHHHHHTT HHHHHHHHTSTTS SSH----HHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT GGGS SS :
ExpBur :eeeeeeeeeebeeeeebeebbeeeeeeebeeeee----eeeeeebeeeeeebeeeeeeebeeebeebeebbeeebeebbeebeeeeeeebeeeee:
Contact : b bb b b bb bb b b b
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[assembly_id:1]
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