Protein Model on 6cik_E_1_J_1
(TEMPLATE: 
6cik
)Protein Model on 6cik_E_1_J_1
(TEMPLATE: 6cik
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | E 1 (N) | polymer(polypeptide(L)) [90 aa] | High mobility group protein B1 :HMGB1_HUMAN | |
| 2 | b | J 1 (M) | polymer(polydeoxyribonucleotide) [39 base] | Nicked 23RSS intermediate forward strand | 38F 42S 46S 103F 122I 126A (identity: 100.0 %/63.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6cik_E_1 identity=63.8% |
queryA 19:FVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP: 118
:****************************** **********************:
6cik_E_1 19:FVQTCREEHKKKHPDASVNFSEFSKKCSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSAFFLFCSEYRPKIKGEHP: 118
SecStr : HHHHHHHHHHHSSS HHHHHHHHHH ------------------------------------------------ HHHHHHHHHHHHHHHH S:
ExpBur :eeeeeeeeeeeeeeeeeeeeeeeeeeeeee------------------------------------------------eeeebeeebbeeebeebeeeee:
Contact : b b b b
queryA 119:GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI: 159
:****************** ********************:
6cik_E_1 119:GLSIGDVAKKLGEMWNNTXXXDKQPYEKKAAKLKEKYEKDI: 159
SecStr :S HHHHHHHHHHHHHH --- HHHHHHHHHHHHHHHH :
ExpBur :eeeeeebeeebeeeeeee---ebeebeeebeeeeeebeeee:
Contact : b b
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[assembly_id:1]
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