Protein Model on 5ze2_E_1_J_1
(TEMPLATE: 
5ze2
)Protein Model on 5ze2_E_1_J_1
(TEMPLATE: 5ze2
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | E 1 (N) | polymer(polypeptide(L)) [117 aa] | HMGB1 A-B box :HMGB1_MOUSE | |
| 2 | b | J 1 (M) | polymer(polydeoxyribonucleotide) [40 base] | DNA (40-MER) | 14S 16Y 38F 39S 42S 43K 46S 49W 103F 122I (identity: 100.0 %/77.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5ze2_E_1 identity=77.6% |
queryA 11:GKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYR: 110
:**************************************** *********************** **************:
5ze2_E_1 11:GKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKXXXAKEKGKFEDMAKADKARYEREMKXXXXXXXXXXXXXXXXXXXXRPPSAFFLFCSEYR: 110
SecStr : HHHHHHHHHHHHHHHH TT HHHHHHHHHHHH --- HHHHHHHHHHHHHHHHHHHH -------------------- HHHHHHHHHH:
ExpBur :eeeeeeebbeeebbeeeeeebeeeeeeeebbeeebeeeee---eeebeebeeebeebeebbeeeee--------------------eeeebeeebbeeeb:
Contact : b b bb bb b b b
queryA 111:PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY: 144
:****** *************** ******:
5ze2_E_1 111:PKIKGEXXXXXIGDVAKKLGEMWNNTXXDDKQPY: 144
SecStr :HHHHH ----- HHHHHHHHHHHHH -- SHHH:
ExpBur :eebeee-----eeeeeebbeeebeee--eeeeee:
Contact : b
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[assembly_id:1]
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