Protein Model on 4nnu_A_1_E_1
(TEMPLATE: 
4nnu
)Protein Model on 4nnu_A_1_E_1
(TEMPLATE: 4nnu
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [193 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
| 2 | b | E 1 (D) | polymer(polydeoxyribonucleotide) [22 base] | DNA2 | 14S 15S 16Y 39S(T) 42S(I) 43K(R) 46S(A) 49W 50K(R) 61E(Q) 64A(Y) 84E(M) 87K 96K 97R 99P(R) 103F(N) 106C(V) 107S(A) 110R(F) 118P (identity: 38.1 %/28.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4nnu_A_1 identity=28.6% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85
:**** *** * * *** * ** * * * * * * * *:
4nnu_A_1 43:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 137
SecStr : --- HHHHHHHHHHHHHHHHSTTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :eeee---eeeeeebbeebeeebeeeeeeeee--eebeeebbeebeeeeeeeeeeeeeeeeeeeeebeeebeebeeebeeeebeebeeeeeeeeeeeeeee:
Contact : bbb b bb b bb b b b b
queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK----GKPDAAKKGV: 175
:*** **** ** * ** * * * * * * * * * * * :
4nnu_A_1 138:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTI: 228
SecStr :HHHHHHHTT HHHHHHHHSSSS S SSH----HHHHHHHHHHHHT TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT GGGS S :
ExpBur :eeeebeeeeebeeeeebeebbbeeeeeeeeeeee----eebeebbeeebeebeeeeeeebeeebeebeebbeeebeebbeebeeeeeeebbeeee:
Contact : b bb b b bb b b
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[assembly_id:1]
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