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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HMGB1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [193 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
2 | b | C 1 (C) | polymer(polydeoxyribonucleotide) [22 base] | DNA1 | 17A(L) 20V(S) 21Q(K) 24R(L) 28K 36V(T) 84E(M) 87K 88K 97R 98P 100S 102F(Y) 118P 123G(Q) 126A(L) 127K 130G(K) 133W 134N(K) 152K(E) 155Y 172K(R) 173K(R) 174G(T) (identity: 40.0 %/28.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4nnu_A_1 identity=28.6% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85 :**** *** * * *** * ** * * * * * * * *: 4nnu_A_1 43:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 137 SecStr : --- HHHHHHHHHHHHHHHHSTTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeee---eeeeeebbeebeeebeeeeeeeee--eebeeebbeebeeeeeeeeeeeeeeeeeeeeebeeebeebeeebeeeebeebeeeeeeeeeeeeeee: Contact : b bb b b b bb bb b queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK----GKPDAAKKGV: 175 :*** **** ** * ** * * * * * * * * * * * : 4nnu_A_1 138:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTI: 228 SecStr :HHHHHHHTT HHHHHHHHSSSS S SSH----HHHHHHHHHHHHT TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT GGGS S : ExpBur :eeeebeeeeebeeeeebeebbbeeeeeeeeeeee----eebeebbeeebeebeeeeeeebeeebeebeebbeeebeebbeebeeeeeeebbeeee: Contact : bb bb b b b b bb b bb b b bbb |