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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HMGB1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [73 aa] | High mobility group protein D :HMGD_DROME | |
2 | b | G 1 (B) | polymer(polydeoxyribonucleotide) [10 base] | DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' | 114K 122I(V) (identity: 50.0 %/44.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3nm9_A_1 identity=44.3% |
queryA 95:PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG: 166 :**** ** * * ** * ** *** ** * * ** * **** * * * *: 3nm9_A_1 4:PKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEWEAKAAKAKDDYDRAVKEFEANG: 73 SecStr : HHHHHHHHHHHHHHHHSSS HHHHHHHHHHHHH--H S HHHHHHHHHHHHHHHHHHHHHHH : ExpBur :eeeeeebeeebbeebeeebeeebeebeeeebeeebbeebe--eeeeeeebeeebeeeeeeeeeeeeeeeeee: Contact : b b |