Protein Model on 3nm9_A_1_G_1 (TEMPLATE: 3nm9 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HMGB1_HUMAN) A 1 (A) polymer(polypeptide(L)) [73 aa] High mobility group protein D :HMGD_DROME
2 b G 1 (B) polymer(polydeoxyribonucleotide) [10 base] DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' 114K 122I(V) (identity: 50.0 %/44.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3nm9_A_1 identity=44.3%
queryA        95:PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG: 166
                :**** **  *     *  ** * **     ***  ** *   *  **   * **** *  *        * *:
3nm9_A_1       4:PKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEWEAKAAKAKDDYDRAVKEFEANG:  73
SecStr          :      HHHHHHHHHHHHHHHHSSS  HHHHHHHHHHHHH--H S  HHHHHHHHHHHHHHHHHHHHHHH  :    
ExpBur          :eeeeeebeeebbeebeeebeeebeebeeeebeeebbeebe--eeeeeeebeeebeeeeeeeeeeeeeeeeee:    
Contact         :                   b       b                                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123