Protein Model on 2gzk_C_1_B_1
(TEMPLATE: 
2gzk
)Protein Model on 2gzk_C_1_B_1
(TEMPLATE: 2gzk
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HMGB1_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [159 aa] | Sex-determining region on Y / HMGB1 :Q6J415_HUMAN:Q548R9_RAT | |
| 2 | b | B 1 (C) | polymer(polydeoxyribonucleotide) [16 base] | 5'-D(*GP*CP*AP*TP*TP*GP*TP*TP*TP*AP*GP*AP*TP*CP*CP*C)-3' | 17A 18F 38F(N) 42S 43K 46S(G) 47E(Y) 49W 50K 61E(F) 64A 68K(Q) 80P(Y) 82K 90K 91D 95P 96K 97R 99P 103F 107S 110R 122I (identity: 75.0 %/67.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2gzk_C_1 identity=67.1% |
queryA 17:AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE: 116
:** * * ** ** ** ** * * * * ***********************************:
2gzk_C_1 11:AFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE: 110
SecStr :HHHHHHHHHHHHHHHH SS HHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHH SS S GGGS TT HHHHHHHHHHHHHHHH:
ExpBur :beebbbeebeeebbeeeeeeeeeebeeebeeebeeeeeeebeeeeeebeeeeeebeeeeeeeeeeeeeeeeeeebeeebeeeeebeeebbeeeeeebeee:
Contact :bb b bb bb bb b b b b b bb bbb b b b b
queryA 117:HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK: 165
:*************************************************:
2gzk_C_1 111:HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK: 159
SecStr : S HHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHH :
ExpBur :eeeeeeeebeebbeebbeebeeeebeebeeebeeeeeebeeeeeeeeee:
Contact : b
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[assembly_id:1]
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