[pdbjlvh2]Protein Model on 8shi_A_1_G

Protein Model on 8shi_A_1_G_1 (TEMPLATE: 8shi )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [273 aa]	MHC class I antigen (Fragment) :F6IQM2_HUMAN
2	b		G 1 (G)	polymer(polypeptide(L)) [184 aa]	T cell receptor alpha	82D 83R 85T 86R(Q) 89R(K) 90D(R) (identity: 50.0 %/82.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8shi_A_1 identity=82.1%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :***  ** * ************************** ******  ***** **** *******      **  ***** ********* ******** **:
8shi_A_1       3:SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWMYGC: 102
SecStr          :  EEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEEE:    
ExpBur          :eebbebebebebbeeeeebebebebebbeeebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbbb:    
Contact         :                                                           bb bb  bb                                

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                : ****** **** * *******  ********** ******   *   * ***  ***** ******  *** *****   * ********* *******:
8shi_A_1     103:DLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 202
SecStr          :EE TTSSEEEEEEEEEETTEEEEEE TTSSSEEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B  B  EEEE SSSSEEEE:    
ExpBur          :bbbeebbeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :***************** ***  ********************************************* ****:
8shi_A_1     203:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 275
SecStr          :EEEEEEEBSS EEEEEEESSSB  SSEEE   EE SSS EEEEEEEEEETT GGGEEEEEEETTSSS EEE  :    
ExpBur          :bbebebbbbbebebebeeeeeeeeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 8shi_A_1_G_1 (TEMPLATE: 8shi )

Input Residue Numbers for Focused Sites