[pdbjlvh2]Protein Model on 7wj2_A_1_C

Protein Model on 7wj2_A_1_C_1 (TEMPLATE: 7wj2 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	MHC class I protein :A0A890UPS4_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [8 aa]	8-mer peptide	26L(M) 28Y 30H(S) 43F 84E 87S(K) 88A(Y) 90D(R) 91T(Q) 94I(T) 98N(S) 101T(N) 105Y 116L 118W 120H(F) 144Y 164S(T) 167K 168S(W) 173E 177Q(R) 180Y 184T 188W 192Y (identity: 50.0 %/81.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7wj2_A_1 identity=81.9%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** ************** ************* ******  ***** **** *******      **  ** ** ****************** *:
7wj2_A_1       2:GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQWMFG: 101
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebbeeeeebebebbbebbeeebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebebbeeeeeeeeeeebebebebb:    
Contact         :    b b b            b                                        b  bb bb  b   b  b   b          b b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :* ****** **** * *******  ********** ******   *   * ***  ***** ******  *** *****   * ********* ******:
7wj2_A_1     102:CDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEAT: 201
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                      b                   b  bb    b   b  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ********************************************* **** *:
7wj2_A_1     202:LRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEP: 277
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :bbbbbebbbbbebebebbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:

Protein Model on 7wj2_A_1_C_1 (TEMPLATE: 7wj2 )

Input Residue Numbers for Focused Sites