[pdbjlvh2]Protein Model on 7byd_F_1_FA

Protein Model on 7byd_F_1_FA_1 (TEMPLATE: 7byd )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [276 aa]	B protein :B2ZHY7_MACMU
2	b		FA 1 (I)	non-polymer(IOD)	IODIDE ION	179A (identity: 100.0 %/77.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7byd_F_1 identity=77.9%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :***** ** * ************ ************* ******  ***** **** ***  *** *   **  *  ********************* *:
7byd_F_1       1:GSHSLRYFGTAVSRPGRGEPRFIYVGYVDDTQFVRFDSDAASPRTEPRAPWVEQEGPEYWEEETRRAKARAQTDRADLRTLRGYYNQSEAGSHTLQWMAG: 100
SecStr          :  EEEEEEEEEE  TTTSS EEEEEEEETTEEEEEEESSSSS   EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebebebbebebbebebeeeeeebebebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbb:    

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :* *** ** **** * *******  ******** * * ***    *      **  *****  * ***  *** ***** *  ********** ******:
7byd_F_1     101:CDLGPNGRLLRGYHQSAYDGKDYIALNEDLRSWIAADMAAQNTQRKWEATRYAERFRAYLEGPCLEWLRRYLENGKETLQHADPPKTHVTHHPVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSSSEEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHSS B  EEEEEEE SSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbbbeeebeebeeebebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                                                         b                                          

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  *** * ************** ****************** ***** **** *:
7byd_F_1     201:LRCWALGFYPAEITLTWQRDGEEQTQDIEFVETRPAGDGTFQKWGAVVVPSGEEQRYTCHVQHKGLPEPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE  SSEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :bebebeebbebebebbbbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebebee:

Protein Model on 7byd_F_1_FA_1 (TEMPLATE: 7byd )

Input Residue Numbers for Focused Sites