Protein Model on 6vb2_A_1_C_1
(TEMPLATE: 
6vb2
)Protein Model on 6vb2_A_1_C_1
(TEMPLATE: 6vb2
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen :F4NBQ8_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | Synthetic peptide GLU-LEU-ARG-ALA-ARG-GLN-GLU-CYS-TYR | 28Y 30H(Y) 66M 80Y 83R 84E(N) 87S(I) 88A(S) 91T(N) 94I(T) 95F(Y) 97V(E) 98N(S) 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 137F(S) 144Y 164S(T) 167K 168S(W) 173E 176H(Q) 177Q(L) 180Y 188W 192Y (identity: 40.0 %/77.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6vb2_A_1 identity=77.9% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * *********** ************* ******* ***** **** ***** * * * ** ************* * * *:
6vb2_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbbbebebebbeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebbbb:
Contact : b b b b bb bb b bb bb bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** **** * ******* ***** **** ****** * * *** ***** ***** *** ***** *****************:
6vb2_A_1 101:CDVGPDGRLLRGYDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebebebbebbeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b bb b bb b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
6vb2_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbebebbbbbebebbbeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeebebeeee:
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[assembly_id:1]
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