[pdbjlvh2]Protein Model on 6p2f_A_1_C

Protein Model on 6p2f_A_1_C_1 (TEMPLATE: 6p2f )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, B-8 alpha chain :1B08_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	MHC I-peptide	28Y 80Y 83R 84E(N) 87S(I) 88A(F) 91T(N) 94I(T) 97V(C) 98N(S) 101T(N) 105Y 116L 120H(Y) 135E(N) 137F(Y) 144Y 164S(T) 168S(W) 173E(V) 176H(Q) 177Q(D) 180Y 184T 188W 192Y (identity: 38.5 %/78.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6p2f_A_1 identity=78.2%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  ************************* ******  ***** **** ***** *       *  *  ** **************** * *:
6p2f_A_1       1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRCSLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebebbbebeebebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebeebbeeeeeeeeeebebebebb:    
Contact         :      b                                                   b  bb  bb  b  b  bb  b   b          b   b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   *  **  ***** ******  *** ** **    *****************:
6p2f_A_1     101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEEEETTEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeeebeebeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :             b b      b                   b   b    b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :****************** ***  ************** **************************** * **** :
6p2f_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGGEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE   :    
ExpBur          :bebbbebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:

Protein Model on 6p2f_A_1_C_1 (TEMPLATE: 6p2f )

Input Residue Numbers for Focused Sites