[pdbjlvh2]Protein Model on 6p23_A_1_C

Protein Model on 6p23_A_1_C_1 (TEMPLATE: 6p23 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, B-8 alpha chain :1B08_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	MHC I-peptide	28Y 30H(D) 43F 80Y 83R 84E(N) 87S(I) 88A(F) 91T(N) 94I(T) 95F(D) 97V(C) 98N(S) 101T(N) 105Y 116L 118W(S) 120H(Y) 135E(N) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(D) 180Y 184T 188W 192Y (identity: 40.0 %/78.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6p23_A_1 identity=78.2%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  ************************* ******  ***** **** ***** *       *  *  ** **************** * *:
6p23_A_1       1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRCSLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebbbbbebeebebbebbbeeeeeebbeebebbeebeeebbeebbeebeeebeebbeebeebeeeeeeeeeeebebebebb:    
Contact         :      b b            b                                    b  bb  bb  b  bb bb  b   b          b b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   *  **  ***** ******  *** ** **    *****************:
6p23_A_1     101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeeeeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :             b        b                   b  bb    b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :****************** ***  ************** **************************** * **** :
6p23_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE   :    
ExpBur          :bbbbbebbbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:

Protein Model on 6p23_A_1_C_1 (TEMPLATE: 6p23 )

Input Residue Numbers for Focused Sites