[pdbjlvh2]Protein Model on 6o9c_A_1_O

Protein Model on 6o9c_A_1_O_1 (TEMPLATE: 6o9c )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [279 aa]	HLA class I histocompatibility antigen, A-3 alpha chain :1A03_HUMAN
2	b		O 1 (B)	non-polymer(SO4)	SULFATE ION	259D (identity: 100.0 %/78.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6o9c_A_1 identity=78.5%

queryA        21:AGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMH: 120
                : ****  ** ************** ************* **** ** ***** **** **** ***      *  ** * *************** * * :
6o9c_A_1       3:SGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMY: 102
SecStr          :   EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEE:    
ExpBur          :eeebbbebebebebbeeeeebebebebebbeeebbebbeebeeeebeeebebbeeeeeebbeebbeebeebeeebeeebeebeeeeeeeeeeebebebbb:    

queryA       121:GCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEA: 220
                :**  * ******** * *******  ********** * ****   *   * ***  ****  ******  *** *****    ***** **********:
6o9c_A_1     103:GCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEA: 202
SecStr          :EEEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEE:    
ExpBur          :bbbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeeb:    

queryA       221:TLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPAS: 299
                :******************* ***  ******************************************* * ****   *:
6o9c_A_1     203:TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSS: 281
SecStr          :EEEEEEEEEBSS  EEEEEETTEE TTT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE     :    
ExpBur          :bbbbbbebbbebebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeeeee:    
Contact         :                                      b

Protein Model on 6o9c_A_1_O_1 (TEMPLATE: 6o9c )

Input Residue Numbers for Focused Sites