[pdbjlvh2]Protein Model on 6ghn_C_1_H

Protein Model on 6ghn_C_1_H_1 (TEMPLATE: 6ghn )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [272 aa]	HLA class I histocompatibility antigen, E alpha chain variant :Q59EE1_HUMAN
2	b		H 1 (C)	non-polymer(SO4)	SULFATE ION	158D 159T (identity: 100.0 %/99.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6ghn_C_1 identity=99.3%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****************************************************************************************************:
6ghn_C_1       1:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEESSSSS  EEE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebebebbeeebbebebeeeebebeeebebbeebeeebbeebbeebeebbeebeeebeebeebeeeeeeeebebebebb:    

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :****************************************************************************************************:
6ghn_C_1     101:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSTTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeeeeeeebbbeebbeeeebbbbeeebeebebeeebbeebeeeeeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                    bb                                                              

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :*********************  ***************************************************:
6ghn_C_1     201:LRCWALGFYPAEITLTWQQDGXXHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEE  -- B   EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE  :    
ExpBur          :bbbebeebbbbebebebeeee--eeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebee:

Protein Model on 6ghn_C_1_H_1 (TEMPLATE: 6ghn )

Input Residue Numbers for Focused Sites