CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-57 alpha chain :1B57_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [10 aa] | THR-SER-MET-SER-PHE-VAL-PRO-ARG-PRO-TRP | 26L(M) 28Y 80Y 84E 87S(N) 88A(M) 98N 101T(I) 105Y 116L(I) 120H(Y) 135E(D) 138A 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 188W 192Y (identity: 47.8 %/77.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6d29_A_1 identity=77.2% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** * *********** ************* ******* ***** **** **** *** ** * *** ********** * * *: 6d29_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG: 100 SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebbbbbebebebbeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeeebeebeebbeebbeebebbbeeeeeeeeeebebebebb: Contact : b b b b bb b b b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ***** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** *****************: 6d29_A_1 101:CDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE: ExpBur :bbbbeebbeeebebebbbeeeebbbbeeebeebeeeeebbeebeeeeeeeebbeebeeebebebbeebeebbeebeeebeeeeebeeebebeeeeeeebb: Contact : b b b b bb b bb b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297 :****************** *** ************** **************************** * **** *: 6d29_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bebebebbbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee: |