Protein Model on 6avg_H_1_F_1
(TEMPLATE: 
6avg
)Protein Model on 6avg_H_1_F_1
(TEMPLATE: 6avg
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | H 1 (F) | polymer(polypeptide(L)) [275 aa] | HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN | |
| 2 | b | F 1 (B) | polymer(polypeptide(L)) [196 aa] | T-cell receptor alpha variable 4,TCR alpha chain :A0A0B4J268_HUMAN | 83R 86R(Q) 87S(I) 179A 180Y 182E 183D(G) 184T(E) 187E 188W (identity: 60.0 %/78.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6avg_H_1 identity=78.9% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** **************************** ****** ***** **** ***** * ** * ** **************** * *:
6avg_H_1 25:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 124
SecStr : EEEEEEEEEE SSSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TT EEEEEEE:
ExpBur :eebbbbbebebebeeeeeebebebebebeebebbebbeeeeeeebeeebebbeebeeebbeebbeebeeeeeebeeebeebeeeeeeeeeeebebebebb:
Contact : b bb
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ********** ****** * * *** ***** ***** *** ** * *****************:
6avg_H_1 125:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 224
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEE SSSEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebebeeebeeebeeeeeeeeebb:
Contact : bb bbb bb
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
:****************** *** ************** **************************** * **** :
6avg_H_1 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
SecStr :EEEEEEEEBSS EEEEEETTEE SSSEEE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bebbbbbbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:
|
[assembly_id:2]
[help]