Protein Model on 5wmn_A_1_E_1
(TEMPLATE: 
5wmn
)Protein Model on 5wmn_A_1_E_1
(TEMPLATE: 5wmn
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [9 aa] | SPI peptide from Influenza A virus | 28Y 30H(Y) 80Y 83R 84E(N) 87S(I) 88A(Y) 90D(A) 91T(Q) 94I(T) 97V(E) 98N(S) 101T(N) 102L 105Y 116L 120H(Y) 137F(Y) 144Y 164S(T) 167K 168S(W) 171A 173E 176H(Q) 177Q(R) 180Y 188W 192Y (identity: 44.8 %/79.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5wmn_A_1 identity=79.0% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** **************************** ****** ***** **** ***** * ** * ** **************** * *:
5wmn_A_1 1:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebbbbbebebebeeeeeebebebebebbebebbebeeeeeeeebbeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebebb:
Contact : b b b bb bb bb b bb bb b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ********** ****** * * *** ***** ***** *** ** * *****************:
5wmn_A_1 101:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEESSSSEEE:
ExpBur :bebbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebbeebeeeeebeebbebbeeebbeebeebbeebeeebebeeebeeebbeeeeeeeebb:
Contact : b b b bb b b bb b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
5wmn_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbbbeebbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
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[assembly_id:1]
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