Protein Model on 5w1v_A_1_C_1
(TEMPLATE: 
5w1v
)Protein Model on 5w1v_A_1_C_1
(TEMPLATE: 5w1v
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [272 aa] | HLA class I histocompatibility antigen, alpha chain E :HLAE_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | VMAPRTLIL peptide from CMV gpUL40 | 26L 28Y 30H 80Y 84E 88A 91T 94I 95F 98N 101T 105Y 118W 120H 137F 144Y 145L 154W 164S 167K 173E 176H 177Q 180Y 184T 188W 192Y (identity: 100.0 %/98.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5w1v_A_1 identity=98.5% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
:****************************************************************************************************:
5w1v_A_1 2:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 101
SecStr : EEEEEEEEE TTT S EEEEEEEETTEEEEEEESSSSS S EE STTTSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEEE:
ExpBur :eebbebebebebbeeeeebebbbebebbebebbebbeeeeeeebeeebebbeeeeeebbeebbeebeebbeebeeebeebeebeeeeeeeebebebebbb:
Contact : b b b b b b b bb b b b b b
queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
:***** **********************************************************************************************:
5w1v_A_1 102:ELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 201
SecStr :EE SSSSEEEEEEEEEETTEEEEEE TTSSSEEESSTTTHHHHHHHTTTTTHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B EEEEEEEE SSS EEE:
ExpBur :ebbeebeeeebbbeebbeeeebbbbbeebeebebeeebbeeebeeeeeeeebeebeeebeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebbb:
Contact : b bb b b b b bb b b b b
queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** ******************************************************:
5w1v_A_1 202:RCWALGFYPAEITLTWQQXXXGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 276
SecStr :EEEEEEEBSS EEEEE --- TT EE EE SSS EEEEEEEE TT TT EEEEE TT SS EEE :
ExpBur :bbbbbbbbebebebebee---eeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeeeeeeeeeeeee:
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[assembly_id:1]
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