Protein Model on 5ib5_A_1_I_1 (TEMPLATE: 5ib5 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [276 aa] HLA class I histocompatibility antigen, B-27 alpha chain :1B27_HUMAN
2 b I 1 (C) non-polymer(CU) COPPER (II) ION 97V(E) (identity: 0.0 %/79.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5ib5_A_1 identity=79.0%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ***************** ******* ***** ******  ***** **** *******      **  *  ****  ************* * *:
5ib5_A_1       1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbbbebebebbeeeeebebebebebbebebbebbeeeeebebeeebebbeebeeebbeebbeebeebbeebbeebebbbebeeeeeeeebebebeeb:    
Contact         :                                                                           b                        

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** **** * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
5ib5_A_1     101:CDVGPDGRLLRGYHQHAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHTTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebeeebeeebbeebeebbeebeebbeeebebebebeeeeeeeeebb:    

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
5ib5_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTTEEE   EE SSS EEEEEEEEEETTGGGGEEEEEE TTSSS EEE    :    
ExpBur          :bbbebeebbbbebebbbbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123