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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [274 aa] | HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [10 aa] | Epstein Barr Virus, Latent membrane protein 2 epitope | 26L(M) 28Y 30H(Y) 83R(Q) 84E 87S(N) 91T(Q) 94I(T) 98N(D) 101T 102L 105Y 120H(Y) 137F(D) 144Y 164S(T) 167K 168S(W) 171A 173E(A) 176H(Q) 177Q 180Y 184T(R) 188W 192Y (identity: 46.2 %/79.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5grd_A_1 identity=79.6% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** ************** ************* **** ** ***** **** **** *** * ** * ********** **** * * *: 5grd_A_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100 SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebebbbebebebbeeeeebebebebebbebebbebeeeeeeeebbeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb: Contact : b b b bb b b b b bb b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ********** * ******* ********** * **** * * ** ****** ***** *** ***** ***** ***********: 5grd_A_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE: ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b b bb b b bb b b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295 :****************** *** ******************************************* * ****: 5grd_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbbeebbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee: |