[pdbjlvh2]Protein Model on 4u1k_A_1_M

Protein Model on 4u1k_A_1_M_1 (TEMPLATE: 4u1k )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [277 aa]	HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN
2	b		M 1 (A)	non-polymer(SO4)	SULFATE ION	30H(Y) 91T(Q) 118W(S) 120H(Y) 135E(D) 137F(Y) 177Q(R) (identity: 0.0 %/79.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4u1k_A_1 identity=79.0%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** **************************** ******  ***** **** ***** *      **  *  ** **************** * *:
4u1k_A_1       2:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 101
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EESSTTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebebebeebebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebebb:    
Contact         :        b                                                            b                          b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   * ***  *****  *****  *** **  *    *****************:
4u1k_A_1     102:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 201
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeeeeeeebbbebbbeeeebbbbeeebeebeeeeebbeebbeebeeeeebeebeebbeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b b                                       b                                            

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
4u1k_A_1     202:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 277
SecStr          :EEEEEEEEBSS  EEEEEETTEE STT EE   EE SSS EEEEEE EEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbebebbbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeeeeeee:

Protein Model on 4u1k_A_1_M_1 (TEMPLATE: 4u1k )

Input Residue Numbers for Focused Sites