Protein Model on 4qru_A_1_C_1
(TEMPLATE: 
4qru
)Protein Model on 4qru_A_1_C_1
(TEMPLATE: 4qru
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-8 alpha chain :1B08_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | 55 kDa immediate-early protein 1 :VIE1_HCMVT | 28Y 30H(D) 43F 45S 57F 80Y 83R 84E(N) 87S(I) 88A(F) 91T(N) 94I(T) 95F(D) 98N(S) 101T(N) 105Y 116L 118W(S) 120H(Y) 135E(N) 137F(Y) 144Y 164S(T) 167K 168S(W) 171A 176H(Q) 177Q(D) 180Y 184T 188W 192Y (identity: 46.9 %/78.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4qru_A_1 identity=78.3% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * ************************* ****** ***** **** ***** * * * ** **************** * *:
4qru_A_1 1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETT S GGGS B HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH - TT SSS EEEEEEE:
ExpBur :eebebbbebebbbbeeeeebebbbbbebbebebbebbeeeeeeeebebbebbeebeeebbeebbeebeeebeebeeebeeb-eeeeeeeeeebebebebb:
Contact : b b b b b b bb bb b bb b b b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ********** ****** * * ** ***** ****** *** ** ** *****************:
4qru_A_1 101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bebbeebeeeebbbebbbeeeebbebeeebeebeeebebbeebeeeeeeeeebeeeeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b b bb b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
4qru_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbbbebbbbbebebebeeeeeebeeebeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
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[assembly_id:1]
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