Protein Model on 4qrs_A_1_C_1
(TEMPLATE: 
4qrs
)Protein Model on 4qrs_A_1_C_1
(TEMPLATE: 4qrs
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-8 alpha chain :1B08_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | Major immediate-early protein :Q9YRL3_HCMV | 28Y 30H(D) 45S 57F 80Y 83R 84E(N) 87S(I) 88A(F) 90D(T) 91T(N) 93Q 94I(T) 95F(D) 97V(E) 98N(S) 101T(N) 102L 105Y 116L 118W(S) 120H(Y) 135E(N) 137F(Y) 144Y 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(D) 180Y 184T 188W 192Y (identity: 44.4 %/78.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4qrs_A_1 identity=78.3% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * ************************* ****** ***** **** ***** * * * ** **************** * *:
4qrs_A_1 1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETT S TTTS B HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebebbbebebebbeeeeebebbbbbebeebebbebbeeeeeeeebeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebebb:
Contact : b b b b b bb bb bb bbb bb bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ********** ****** * * ** ***** ****** *** ** ** *****************:
4qrs_A_1 101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bebbeebeeeebbbebbbeeeebbebeeebeebeeebebbeebeeeeeeeebbeeeeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b b bb b b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
4qrs_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbbbeebbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeee:
|
[assembly_id:1]
[help]