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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen :C5MK56_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [11 aa] | Epstein-Barr nuclear antigen 1 :EBNA1_EBVA8 | 26L(M) 28Y 30H(Y) 80Y 83R 84E(N) 87S(I) 88A(F) 91T(N) 94I(T) 95F(Y) 97V(E) 98N(S) 101T(N) 102L 105Y 118W(R) 120H(Y) 137F(S) 164S(T) 167K 168S(W) 176H(Q) 177Q(R) 180Y 188W 192Y (identity: 33.3 %/76.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4prb_A_1 identity=76.8% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** * *********** ************* ****** ***** **** ***** * * * ** ************* * * *: 4prb_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100 SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebebbbebebbbbeeeeebebebebebbebebbebebeeeeeebbeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebebb: Contact : b b b b bb bb b bb bb bb b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ****** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** ********** ******: 4prb_A_1 101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200 SecStr :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE: ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebeeebebebbeebeebbeebeeebeeebebeeebeeeeeeeeebb: Contact : b b bb bb b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297 :****************** *** ************** **************************** * **** *: 4prb_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbbeebbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebeeee: |