[pdbjlvh2]Protein Model on 4lcy_A_1_C

Protein Model on 4lcy_A_1_C_1 (TEMPLATE: 4lcy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:7]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA class I histocompatibility antigen, B-46 alpha chain :1B46_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	dengue1 poly peptide	26L(M) 28Y 30H(Y) 83R 84E 87S(K) 88A(Y) 91T(Q) 94I(T) 97V 98N(S) 101T(N) 102L 105Y 118W(R) 120H(Y) 164S(T) 167K 168S(W) 173E 176H(Q) 177Q(W) 180Y 184T(L) 188W 192Y (identity: 42.3 %/79.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4lcy_A_1 identity=79.6%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  *********** ************* ******* ***** **** *******      **  ** ** **************** * *:
4lcy_A_1       1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQRMYG: 100
SecStr          :  EEEEEEEEEE  TTT S EEEEEEEETTEEEEEEETT SS SEEE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebbbebeebebbbbbbebeeeebbeebebbeebeeebbeebbeebeeebeebbeebeebbeeeeeeeeeebebebebb:    
Contact         :    b b b                                                    bb  bb  b  b  bb  bb  b            b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ***** **** ******   *   * ***  *****  *****  *** *****    *****************:
4lcy_A_1     101:CDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQWRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSTTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebebebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                                          b  bb    b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :****************** ***  ************** **************************** * ****:
4lcy_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE  :    
ExpBur          :bbbbbeebbbbebebbbeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 4lcy_A_1_C_1 (TEMPLATE: 4lcy )

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