[pdbjlvh2]Protein Model on 3vrj_A_1_C

Protein Model on 3vrj_A_1_C_1 (TEMPLATE: 3vrj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, B-57 alpha chain :1B57_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [10 aa]	10-mer peptide	26L(M) 28Y 30H(Y) 66M 80Y 84E 87S(N) 88A(M) 90D(A) 91T(S) 94I(T) 97V(E) 98N 101T(I) 102L(A) 105Y 120H(Y) 164S(T) 167K 168S(W) 173E(V) 176H(Q) 180Y 188W 192Y (identity: 40.0 %/77.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3vrj_A_1 identity=77.1%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :***  ** *  *********** ************* ******* ***** **** **** ***     **  * ***    **********  * * **:
3vrj_A_1       2:SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGC: 101
SecStr          : EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEEE:    
ExpBur          :ebbbbbebebebbeeeeebebebebebbebebbebbbeeeeeebbbebebbeebeeebbebbbeebeeebeebbeebeebbebeeeeeeeebebebebbb:    
Contact         :   b b b                                   b             b   b  bb bb  b  bb  bb  b              b  

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                :  ***** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    ******************:
3vrj_A_1     102:DVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATL: 201
SecStr          :EE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B  EEEEEEEESSSSEEEE:    
ExpBur          :bbbeebebeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeeebeeeeeebebebbeebeebbeebeeebeeeeebeeebbeeeeeeeebbb:    
Contact         :                                         b  bb    b  b   b       b   b                              

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :***************** ***  ************** **************************** * **** *:
3vrj_A_1     202:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :bbebeebbbbebebbbeeeeeebeeebeebeeeeeeeebbebbbbbebeeebbeebbbbbebebbeeeeeeeeee:

Protein Model on 3vrj_A_1_C_1 (TEMPLATE: 3vrj )

Input Residue Numbers for Focused Sites