Protein Model on 3vfv_A_1_C_1
(TEMPLATE: 
3vfv
)Protein Model on 3vfv_A_1_C_1
(TEMPLATE: 3vfv
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen :C5MK56_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [13 aa] | LPEP peptide from EBV, P9A, LPEPLPQGALTAY | 26L(M) 28Y 30H(Y) 83R 84E(N) 87S(I) 88A(F) 90D(T) 91T(N) 94I(T) 95F(Y) 97V(E) 98N(S) 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 137F(S) 144Y 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(R) 180Y 184T(L) 188W 192Y (identity: 31.2 %/76.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3vfv_A_1 identity=76.8% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * ********** ************* ****** ***** **** ***** * * * ** ************* * * *:
3vfv_A_1 1:GSHSMRYFYTAMSRPGRGEPRFXAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100
SecStr : EEEEEEEEEE TTSSS B - EEEETTEEEEE TTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebebbbebebebbeeeeebeb-bebebbebebbebebeeeeeebbeebebbeebeeebbeebbeebeeebeebbeebeebeeeeeeeeeeebebebebb:
Contact : b b b bb bb bb bb bb bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ****** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** ********** ******:
3vfv_A_1 101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE:
ExpBur :bebbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebeeebebebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b bb b b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
3vfv_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbbbeebbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
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[assembly_id:1]
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