Protein Model on 3vcl_A_1_C_1
(TEMPLATE: 
3vcl
)Protein Model on 3vcl_A_1_C_1
(TEMPLATE: 3vcl
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [11 aa] | peptide from Tegument protein pp65 :F5HB26_HCMV | 26L(M) 28Y 30H(Y) 80Y 83R 84E(N) 87S(I) 88A(Y) 91T(Q) 94I(T) 97V(E) 98N(S) 101T(N) 102L 105Y 116L 120H(Y) 135E(D) 137F(Y) 144Y 164S(T) 167K 168S(W) 173E 176H(Q) 177Q(R) 180Y 184T(E) 188W 192Y (identity: 40.0 %/78.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3vcl_A_1 identity=78.9% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** **************************** ****** ***** **** ***** * ** * ** **************** * *:
3vcl_A_1 1:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebebbbebebebeeeeeebebebebebbebebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebebb:
Contact : b b b b bb bb b b bb bb b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ********** ****** * * *** ***** ***** *** ** * *****************:
3vcl_A_1 101:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHSS B EEEEEEEESSSSEEE:
ExpBur :bebbeebbeeebbbebbbeeeebbbbeeebeebeeeeebbeebbeebeeeeebeebeeebeeebbeebeebbeebeeebebeeebeeebeeeeeeeeebb:
Contact : b b b b bb b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
:****************** *** ************** **************************** * **** :
3vcl_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr :EEEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbebeebbbbebebebbeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:
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[assembly_id:1]
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