[pdbjlvh2]Protein Model on 3upr_A_1_H

Protein Model on 3upr_A_1_H_1 (TEMPLATE: 3upr )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, B-57 alpha chain :1B57_HUMAN
2	b		H 1 (A)	non-polymer(CL)	CHLORIDE ION	166Q(R) (identity: 0.0 %/77.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3upr_A_1 identity=77.1%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :***  ** *  *********** ************* ******* ***** **** **** ***     **  * ***    **********  * * **:
3upr_A_1       3:SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGC: 102
SecStr          : EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEEE:    
ExpBur          :ebebbbebebbbbeeeeeeebebebebbebebbebbbeeeeeebeeebebbeebeeebbebbbeebeebbeebbeebeebbebeeeeeeeebebebebbb:    

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                :  ***** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    ******************:
3upr_A_1     103:DVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATL: 202
SecStr          :EE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEE  SSSEEEE:    
ExpBur          :ebbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebbbeeeeeeebbb:    
Contact         :                                           b                                                        

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :***************** ***  ************** **************************** * **** *:
3upr_A_1     203:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 277
SecStr          :EEEEEEEBSS  EEEEEETTEE TTT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :ebebeebbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeeee:

Protein Model on 3upr_A_1_H_1 (TEMPLATE: 3upr )

Input Residue Numbers for Focused Sites