Protein Model on 3spv_A_1_C_1
(TEMPLATE: 
3spv
)Protein Model on 3spv_A_1_C_1
(TEMPLATE: 3spv
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-8 alpha chain :1B08_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [8 aa] | peptide from Trans-activator protein BZLF1 :BZLF1_EBVB9 | 26L(M) 28Y 30H(D) 83R 84E(N) 87S(I) 88A(F) 90D(T) 91T(N) 94I(T) 95F(D) 97V(E) 98N(S) 101T(N) 105Y 116L 118W(S) 120H(Y) 135E(N) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(D) 180Y 184T 188W 192Y (identity: 33.3 %/78.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3spv_A_1 identity=78.3% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * ************************* ****** ***** **** ***** * * * ** **************** * *:
3spv_A_1 1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETT SSSSSS B HHHHTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebebbbebebebbeeeeebebbbbbebbebebbebbeeeeeeeebeebebbeebeeebeeebbeebeeebeebbeebeebeeeeeeeeeeebebebebb:
Contact : b b b bb bb bb bb bb b b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ********** ****** * * ** ***** ****** *** ** ** *****************:
3spv_A_1 101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeeeeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b bb b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
3spv_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbbbebbbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeee:
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[assembly_id:1]
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