[pdbjlvh2]Protein Model on 3sko_A_1_D

Protein Model on 3sko_A_1_D_1 (TEMPLATE: 3sko )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [273 aa]	HLA class I histocompatibility antigen, B-8 alpha chain :1B08_HUMAN
2	b		D 1 (A)	non-polymer(NA)	SODIUM ION	154W 155T 156A 165E(Q) (identity: 75.0 %/77.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3sko_A_1 identity=77.9%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  ************************* ******   **** **** ***** *       *  *  ** **************** * *:
3sko_A_1       1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRXXXRAPWIEQEGPEYWDRNTQAFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETT S   ---  GGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebbbbbebbebebbebbeeeeeee---ebebbeebeeebeeeeeeebeeebeebeeebeebbeeeeeeeeeebebebebb:    

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   *  **  ***** ******  *** ** **    *****************:
3sko_A_1     101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbeebbeeeebbebeeebeebeeebebbeebeeeeeeeeebeebeeebeeebbeebeebbeebeeebeeebebeeebbeeeeeeeebb:    
Contact         :                                bbb        b                                                        

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
3sko_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :bbbbbeebbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:

Protein Model on 3sko_A_1_D_1 (TEMPLATE: 3sko )

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