Protein Model on 3mv7_A_1_D_1 (TEMPLATE: 3mv7 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [276 aa] HLA class I histocompatibility antigen, B-35 alpha chain :1B35_HUMAN
2 b D 1 (D) polymer(polypeptide(L)) [200 aa] alpha chain of the TK3 TCR 86R(Q) 87S(I) 90D(T) 172S(R) 176H(Q) 180Y 184T(L) (identity: 14.3 %/76.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3mv7_A_1 identity=76.8%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  *********** ************* ******  ***** **** ***** *       *  *  ** *************  * * *:
3mv7_A_1       1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100
SecStr          :  EEEEEEEEEE  SSSS  EEEEEEEETTEEEEEEES SSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebbbbbebbebebbebbbeeeebebeeebebbeebeeebbeebbeebeebbeebeeebeebbeeeeeeeeeebebebebb:    
Contact         :                                                                bb  b                               

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :* ****** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    ********** ******:
3mv7_A_1     101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSS EE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeebeeeebbeebeeebeeebbebbeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                                                  b   b   b   b                                     

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
3mv7_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEE  SS   EEEEEE TT SS EEE    :    
ExpBur          :bbbebeebbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebebeeeeebbbebebeebeeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123