[pdbjlvh2]Protein Model on 3kyn_A_1_C

Protein Model on 3kyn_A_1_C_1 (TEMPLATE: 3kyn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	MHC class I antigen :Q9MYA2_HUMAN
2	b		C 1 (P)	polymer(polypeptide(L)) [9 aa]	KGPPAALTL peptide	26L(M) 28Y 80Y 83R(E) 84E 87S(N) 91T(H) 94I(T) 98N 101T 102L 105Y 118W 135E 137F(Y) 144Y 145L 154W 164S 167K 177Q(R) 180Y 188W 192Y (identity: 70.8 %/78.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3kyn_A_1 identity=78.1%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :***  **   ************  ************ * ***** ***** **** ***  ***     **  * ** *********** ******* **:
3kyn_A_1       2:SHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRFDSDSASPRMEPRAPWVEQEGPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEASSHTLQWMIGC: 101
SecStr          :  EEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEEE:    
ExpBur          :ebbbbbebbbebbeeeeebebbbbbebbebebbebbbeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebebbb:    
Contact         :   b b                                                   b  bb  b   b  b   b  bb  b            b    

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                : ** ***  ****  ******** ********** *******  *   *  **  ***** ******* *** *** *    **********  * ****:
3kyn_A_1     102:DLGSDGRLIRGYERYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANVAEQRRAYLEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYEATL: 201
SecStr          :E  SSSS  EEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS     EEEEEEEEETTTEEEE:    
ExpBur          :bbbeeeeeeebebeebbeeeebbebeeebeebebeeebbeebeeebeeeebbeeebeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    
Contact         :            b b      bb        b         b  b         b  b       b   b                              

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :************ **** ***  *** *****************************************  ****:
3kyn_A_1     202:RCWALGFYPAEIILTWQRDGEDQTQDVELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLMLRWK: 275
SecStr          :EEEEEEESSS  EEEEEETT    TT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE   :    
ExpBur          :bbbbeebbbbebebebbeeeeeeeeebeeeeeeeeeeebbebbbbbebeeebbeebbbbbebeebeeeeebeee:

Protein Model on 3kyn_A_1_C_1 (TEMPLATE: 3kyn )

Input Residue Numbers for Focused Sites