Protein Model on 3d18_A_1_C_1
(TEMPLATE: 
3d18
)Protein Model on 3d18_A_1_C_1
(TEMPLATE: 3d18
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-27 alpha chain :1B27_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | Latent membrane protein 2 | 28Y 30H 45S(T) 66M(E) 80Y 83R 84E 86R(Q) 87S(I) 88A(C) 94I(T) 97V(E) 98N(D) 101T 105Y 120H(Y) 135E(H) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 184T(E) 188W 192Y (identity: 42.9 %/79.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3d18_A_1 identity=79.0% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ***************** ******* ***** ****** ***** **** ******* ** * **** ************* * *:
3d18_A_1 1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebebbbebebebbeeeeebebebebebbebebbebbeeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebebbbeeeeeeeeeebebebbbb:
Contact : b b b b b bb bbb b bb b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** **** * ******* ***** **** ****** * * ** ***** ***** *** ***** *****************:
3d18_A_1 101:CDVGPDGRLLRGYHQHAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeebbeebeeebebebbeebeebbeebeebbeeebebeeebeeeeeeeeebb:
Contact : b b b bb b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
3d18_A_1 201:LRCWALGFYPAEITLTWQRDGEDETQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbbbebbbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
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[assembly_id:1]
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