Protein Model on 3bzf_A_1_C_1 (TEMPLATE: 3bzf )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [276 aa] HLA class I histocompatibility antigen, alpha chain E :HLAE_HUMAN
2 b C 1 (P) polymer(polypeptide(L)) [9 aa] leader peptide of HLA class I histocompatibility antigen, Cw-7 alpha chain :1C07_HUMAN 28Y 30H 45S 66M 80Y 84E 87S 88A 91T 94I 95F 97V 98N 101T 102L 105Y 116L 118W 120H 144Y 145L 154W 164S 167K 168S 173E 176H 177Q 180Y 188W 192Y (identity: 100.0 %/99.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3bzf_A_1 identity=99.6%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****************************************************************************************************:
3bzf_A_1       1:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGSS  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebebebbebebbebbeeeeeeebbeebebbeebeeebbeebbeebeebbeebeeebeebbeeeeeeeeeebebebebb:    
Contact         :      b b              b                    b             b   b  bb  b  bb bb  bb  b          b b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :****** *********************************************************************************************:
3bzf_A_1     101:CELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSSTTHHHHHHHHHTTTHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeeeeeeebbbebbbeeeebbebeeebeebebeeeebeebeeebeeeeebeeebeebeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                      bb        b         b  bb    b  bb  b       b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************************************************************************:
3bzf_A_1     201:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :bebebebbbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123