Protein Model on 3bvn_A_1_C_1
(TEMPLATE: 
3bvn
)Protein Model on 3bvn_A_1_C_1
(TEMPLATE: 3bvn
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [277 aa] | HLA class I histocompatibility antigen, B*1402 alpha chain :Q56H30_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | Latent membrane protein 2 peptide :LMP2_EBV | 28Y 30H(Y) 45S 55V 57F 66M(E) 83R 84E(N) 87S(I) 88A(C) 90D(T) 91T(N) 94I(T) 95F(D) 98N(S) 101T(N) 102L 105Y 116L 118W 120H(Y) 137F 144Y 164S(T) 167K 168S(W) 171A 173E 177Q(L) 180Y 184T 188W (identity: 53.1 %/79.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3bvn_A_1 identity=79.4% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * ************************** ****** ***** **** ***** * * * ** ****************** *:
3bvn_A_1 2:GSHSMRYFYTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRNLRGYYNQSEAGSHTLQWMYG: 101
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SSGGGSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbbbebebebbeeeeebebebebebeebebbebebeeeeeebbeebebbeebeeebbeebbeebeebbeebbeebeebbeeeeeeeeeebebeebbb:
Contact : b b b b b b bb bb bb bb b bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** **** ********* ***** **** ****** * * *** ***** ****** ** ***** *****************:
3bvn_A_1 102:CDVGPDGRLLRGYNQFAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHEAT: 201
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSTTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEE SSSEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebbeeeeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b b bb b b b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPA: 298
:****************** *** ************** **************************** * **** * :
3bvn_A_1 202:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS: 278
SecStr :EEEEEEEEBSS EEEEEESSSB TTTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbebeebbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeeee:
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[assembly_id:1]
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