[pdbjlvh2]Protein Model on 2ypl_A_1_E

Protein Model on 2ypl_A_1_E_1 (TEMPLATE: 2ypl )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-57 ALPHA CHAIN :1B57_HUMAN
2	b		E 1 (E)	polymer(polypeptide(L)) [238 aa]	AGA T-CELL RECEPTOR BETA CHAIN	171A 172S(R) 173E(V) 175E 176H(Q) (identity: 40.0 %/77.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2ypl_A_1 identity=77.4%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  *********** ************* ******* ***** **** **** ***     **  * ***    **********  * * *:
2ypl_A_1       1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebbbebbebebbebebeeeeeebeeebebbeebeeebbeeebeebeebbeebbeebebbbeeeeeeeeeebebebbbb:    

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
2ypl_A_1     101:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLSSWTAADTAAQIIQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeebeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                                 bbb bb                                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :****************** ***  ************** **************************** * ****:
2ypl_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE  :    
ExpBur          :bbbebebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeebebee:

Protein Model on 2ypl_A_1_E_1 (TEMPLATE: 2ypl )

Input Residue Numbers for Focused Sites