Protein Model on 2bvo_A_1_C_1
(TEMPLATE: 
2bvo
)Protein Model on 2bvo_A_1_C_1
(TEMPLATE: 2bvo
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-57 ALPHA CHAIN :1B57_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [11 aa] | GAG PROTEIN :Q70A02_9HIV1 | 26L(M) 28Y 30H(Y) 80Y 84E 87S(N) 88A(M) 94I(T) 97V(E) 98N 101T(I) 105Y 116L(I) 120H(Y) 137F(Y) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 188W 192Y (identity: 40.0 %/77.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2bvo_A_1 identity=77.1% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * *********** ************* ******* ***** **** **** *** ** * *** ********** * * *:
2bvo_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebebbbebebebbeeeeebebebbbebbebebbebebeeeeeebbeebebbeebeeebbeeebeebeebbeebbeebebbbebeeeeeeeebebebbbb:
Contact : b b b b b bb b bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** *****************:
2bvo_A_1 101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebbeebeeeebbeebeeebebebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b bb b bb b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
:****************** *** ************** **************************** * **** :
2bvo_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE -:
ExpBur :bbbbbebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee-:
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[assembly_id:1]
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