[pdbjlvh2]Protein Model on 2ak4_A_1_E

Protein Model on 2ak4_A_1_E_1 (TEMPLATE: 2ak4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	HLA-B35 variant
2	b		E 1 (E)	polymer(polypeptide(L)) [241 aa]	SB27 T cell receptor beta chain	86R(Q) 90D(T) 171A 172S(R) 175E 176H(Q) (identity: 33.3 %/76.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2ak4_A_1 identity=76.8%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  *********** ************* ******  ***** **** ***** *       *  *  ** *************  * * *:
2ak4_A_1       1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100
SecStr          :   EEEEEEEEE  SSSS  EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebeebbeeeeeeeeeebebebebb:    
Contact         :                                                                b   b                               

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :* ****** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    ********** ******:
2ak4_A_1     101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeebeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                                                 bb  bb                                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
2ak4_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbebebbbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeeeeeeeebeeee:

Protein Model on 2ak4_A_1_E_1 (TEMPLATE: 2ak4 )

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