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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-35 alpha chain :1B35_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [13 aa] | EBV-peptide LPEPLPQGQLTAY | 26L(M) 28Y 30H(Y) 80Y 83R 84E(N) 87S(I) 88A(F) 90D(T) 91T(N) 94I(T) 95F(Y) 97V(E) 98N(S) 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 137F(S) 144Y 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(L) 180Y 184T(L) 188W 192Y (identity: 33.3 %/76.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1zhk_A_1 identity=76.8% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** * *********** ************* ****** ***** **** ***** * * * ** ************* * * *: 1zhk_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100 SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebebbbebebebbeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebebb: Contact : b b b b bb bb bb bb bb bb b b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ****** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** ********** ******: 1zhk_A_1 101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200 SecStr :EEE SS SEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE: ExpBur :bebbeeeebeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeeebeebeeebeeebbebbeebbeebeeebeeebebeeebeeeeeeeeebb: Contact : b b b bb b b bb b b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297 :****************** *** ************** **************************** * **** *: 1zhk_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE : ExpBur :bbbebebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee: |