[pdbjlvh2]Protein Model on 1mi5_A_1_D

Protein Model on 1mi5_A_1_D_1 (TEMPLATE: 1mi5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [277 aa]	MHC heavy chain :1B08_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [201 aa]	TcR alpha chain :TCA_HUMAN	83R 86R(Q) 87S(I) 90D(T) 93Q 171A 172S(R) 173E(V) 175E 176H(Q) 179A (identity: 45.5 %/78.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1mi5_A_1 identity=78.0%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  ************************* ******  ***** **** ***** *       *  *  ** **************** * *:
1mi5_A_1       1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :   EEEEEEEEE  TTTSS EEEEEEEETTEEEEEEETT SS   SS  HHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeeeebbbbbebeebebbebeeeeeeeebebbbebbeebeeebbeeebeebeeebeebeeebeebeeeeeeeeeeebbbebebb:    
Contact         :                                                             b  bb  b  b                            

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   *  **  ***** ******  *** ** **    *****************:
1mi5_A_1     101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TT SEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTT HHHHHHHHHTHHHHHHHHHHHHTTTTSS  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeebeeeebbbeebbeeeebbebeeebeebebeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                                 bbb bb  b                                          

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPA: 298
                :****************** ***  ************** **************************** * **** * :
1mi5_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS: 277
SecStr          :EEEEEEEEBSS  EEEEEETTEE SSSEEE   EE SSS EEEEEEEEEETT TTSEEEEEE TT SS EEE     :    
ExpBur          :bbbebeebbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeeeeeeee:

Protein Model on 1mi5_A_1_D_1 (TEMPLATE: 1mi5 )

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