[pdbjlvh2]Protein Model on 1jgd_A_1_C

Protein Model on 1jgd_A_1_C_1 (TEMPLATE: 1jgd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	HUMAN LYMPHOCYTE ANTIGEN HLA-B27 :1B27_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [10 aa]	peptide s10R	26L(M) 28Y 30H 45S(T) 66M(E) 80Y 83R 84E 86R(Q) 87S(I) 88A(C) 94I(T) 97V(E) 98N(D) 101T 102L 105Y 116L 120H(Y) 137F(H) 144Y 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(L) 180Y 184T(E) 188W 192Y (identity: 46.9 %/79.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1jgd_A_1 identity=79.0%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ***************** ******* ***** ******  ***** **** *******      **  *  ****  ************* * *:
1jgd_A_1       1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr          :  EEEEEEEEEE  GGGSS EEEEEEEETTEEEEEEETTSSS   EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebbeeeeebebebebebbebebbebbbeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebeebbeeeeeeeeeebebebbbb:    
Contact         :    b b b              b                    b             b  bb bbb     b  bb  bb  b          b   b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** **** * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
1jgd_A_1     101:CDVGPDGRLLRGYHQHAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeebbeebeeebebebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :               b      b                   b  bb  b b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
1jgd_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :bbbebebbbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:

Protein Model on 1jgd_A_1_C_1 (TEMPLATE: 1jgd )

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