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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [317 aa] | Replicase polyprotein 1a :R1A_CVHSA | |
2 | b | E 1 (A) | non-polymer(NA) | SODIUM ION | 1643S 1654S 1658L 1825I 1826D 1827G (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5y3e_A_1 identity=100.0% |
queryA 1541:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG:1640 :****************************************************************************************************: 5y3e_A_1 2:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG: 101 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHHH TTHHHHHHHHHHHHTTS EETT: ExpBur :eeeebebebbbbeeeeeeeebebeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebbe: queryA 1641:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT:1740 :****************************************************************************************************: 5y3e_A_1 102:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT: 201 SecStr :EE TT HHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHHT TT HHHHHHHHHTTBS TT EEEEEEEETTTEEEEEEEE: ExpBur :bbbbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbebebeeebebeebbeebbebbebeebebbbbbebeeeeeeeeeee: Contact : b b b queryA 1741:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV:1840 :****************************************************************************************************: 5y3e_A_1 202:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV: 301 SecStr :THHHHEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEES EEEEE: ExpBur :bbebbbbeebbbbeebeeebeeeeeeeeebebbbebbebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeeebbebebeeeeebeebebeb: Contact : bbb queryA 1841:TDVFYKETSYTTTI:1854 :**************: 5y3e_A_1 302:TDVFYKETSYTTTI: 315 SecStr :EEEEEE SEEE : ExpBur :bbbbbebeeeebee: |