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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | Papain-like proteinase :R1A_CVHSA | |
2 | b | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 1697K 1702L 1703G 1707E (identity: 100.0 %/99.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4ovz_A_1 identity=99.3% |
queryA 1548:FTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWA:1647 :****************************************************************************************************: 4ovz_A_1 9:FTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWA: 108 SecStr : EESSSSS B SSS HHHHHSSB SSSS TT SS S EEB SHHHHHHHHHHH TTHHHHHHHHHHHHTTS EETTEE : ExpBur :ebbbbeeeeeeeeeeeeeebbeebeebebebeebbeeeeeeeeeeeebbbebeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeebbbbeee: queryA 1648:DNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVEAVMY:1747 :*** ************************************************************************************************: 4ovz_A_1 109:DNNUYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVEAVMY: 208 SecStr :TTTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEE TTS EEEEEE THHHHEE: ExpBur :eebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbeeebeebbebeebbeebbebbebeebebbbbebbeeeeeeeeeeeeeebbbb: Contact : b bb b queryA 1748:MGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDVFYKE:1847 :************************************************************** *************************************: 4ovz_A_1 209:MGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQUGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDVFYKE: 308 SecStr :ES S HHHHHH EEE SSSS EEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEESEEEEEEEEEEEE : ExpBur :eebbbbeebeebbeeebeeeeebbeebeebebebbbbbbeeeeeebeeeebebbbbbeeeeeebebbbbbbeebbbebebeeeeebeebebebbbbbbeb: queryA 1848:TSYTT:1852 :*****: 4ovz_A_1 309:TSYTT: 313 SecStr :SEEE : ExpBur :eeeee: |