[pdbjlvh2]Protein Model on 4mm3_B_1_A

Protein Model on 4mm3_B_1_A_1 (TEMPLATE: 4mm3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	B 1 (B)	polymer(polypeptide(L)) [316 aa]	Papain-like proteinase :R1A_CVHSA
2	b		A 1 (A)	polymer(polypeptide(L)) [76 aa]	Ubiquitin :UBC_HUMAN	1649N 1651C 1652Y 1702L 1703G 1704D 1706R 1707E 1710T 1739L 1743E 1747Y 1748M 1762I 1763P 1765V 1772Q 1787P 1804Y 1809Q 1810C 1811G 1812H 1813Y 1841T (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4mm3_B_1 identity=100.0%

queryA      1541:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG:1640
                :****************************************************************************************************:
4mm3_B_1       2:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG: 101
SecStr          :  S    EEESSSSS EE    SS  SHHHH SEEETTEEGGG    SS SS EEEE   SSSHHHHHHHHH    STHHHHHHHHHHHHTTS   EETT:    
ExpBur          :eeeebebebbbbeeeeeeeebeeeeebeeeeeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebee:    

queryA      1641:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT:1740
                :****************************************************************************************************:
4mm3_B_1     102:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT: 201
SecStr          :EE   S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHTTT  HHHHHHHHHHTT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEE:    
ExpBur          :bbbbeebeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbeeebeeeeebeebbeebbebbebeebebbbbbebeeeeeeeeeee:    
Contact         :        b bb                                                 bbb bb  b                            b 

queryA      1741:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV:1840
                :****************************************************************************************************:
4mm3_B_1     202:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV: 301
SecStr          :GGGGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEESEEEEEE:    
ExpBur          :ebebbbbeebbbbeebbeebeeebeeeeebebbbbebebebbbbbbeeeeeebeeeebebbbbeeeeeeeeebbbbbeeebbbebebeeeeeeeebebbb:    
Contact         :  b   bb             bb b      b              b                b    bbbbb                           

queryA      1841:TDVFYKETSYTTTIK:1855
                :***************:
4mm3_B_1     302:TDVFYKETSYTTTIK: 316
SecStr          :EEEEEE SEEE    :    
ExpBur          :bbbbbebeebeeeee:    
Contact         :b

Protein Model on 4mm3_B_1_A_1 (TEMPLATE: 4mm3 )

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