Protein Model on 1q2w_A_1_B_1
(TEMPLATE: 
1q2w
)Protein Model on 1q2w_A_1_B_1
(TEMPLATE: 1q2w
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [295 aa] | 3C-like protease :R1A_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [297 aa] | 3C-like protease :R1A_CVHSA | 3244R 3246M 3247A 3248F 3249P 3250S 3251G 3254E 3362P 3363S 3364G 3365V 3366Y 3367Q 3368C 3377K 3379S 3380F 3381L 3409T 3410G 3525T 3526I 3530E 3538R 3539Q (identity: 100.0 %/98.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1q2w_A_1 identity=98.7% |
queryA 3243:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK:3342
:****************************************** ******************************************************:
1q2w_A_1 5:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICXXXXMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 104
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG ---- S HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT SEE:
ExpBur :eeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbe----eeebebeeebeeeeeeebebebeeeebebeeeeeeebbbebebeeebeebbeee:
Contact : b bbbbbb b
queryA 3343:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL:3442
:****************************************************************************************************:
1q2w_A_1 105:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 204
SecStr :E TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SS S B HH:
ExpBur :eeebeebebbbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebebbb:
Contact : bbbbbbb b bbb bb
queryA 3443:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS:3541
:***************************************************************************************************:
1q2w_A_1 205:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS: 303
SecStr :HHHHHHHHHHHTT TT S HHHHHHHHGGGTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHH :
ExpBur :bbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeeeeebbbbbbbebbeeebe:
Contact : bb b bb
|
[assembly_id:1]
[help]