Protein Model on 6nur_A_1_B_1 (TEMPLATE: 6nur )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(R1AB_SARS) A 1 (A) polymer(polypeptide(L)) [793 aa] NSP12 :R1AB_CVHSA
2 b B 1 (B) polymer(polypeptide(L)) [115 aa] NSP8 :R1A_CVHSA 4639L 4640L 4642Y 4643D 4693T 4695F 4697P 4698L 4699V 4700R 4701K 4707V 4708P 4709F 4710V 4737F 4740L 4741L 4744A 4747P 4748A 4749M 4750H 4751A 4752A 4753S 4754G 4755N 4756L 4757L 4758L 4759D 4760K 4761R 4765F 4767V 4769A 4771T 4772N 4774V 4776F 4874P 4875F 4878W 4883L 4884Y 4886D 4887S 4892D (identity: 100.0 %/98.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6nur_A_1 identity=98.8%
queryA      4486:QRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAGIVGVLTLDNQDLNGNW:4585
                :****************************************************************************************************:
6nur_A_1     119:QRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAGIVGVLTLDNQDLNGNW: 218
SecStr          :    SSBHHHHHHHHHT  STT HHHHHHHHHTTSS GGGGGSTTTT SSSSTTHHHHHGGGHHHHHHHHHHHHHHHHHHHHTTEEEE  GGGBBTT  B:    
ExpBur          :eeebebbbeebbebbbebeeeebeebeebbbebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbbebbebbeebeeebeebbbbbebbbbebeb:    

queryA      4586:YDFGDFVQVAPGCGVPIVDSYYSLLMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCINCLDDRCILHCANFNVL:4685
                :****************************************************************************************************:
6nur_A_1     219:YDFGDFVQVAPGCGVPIVDSYYSLLMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCINCLDDRCILHCANFNVL: 318
SecStr          :   TT EE  TT  EEE HHHHHHHHHHHHHTTTTGGGGBTTS TTS B    TT    HHHHHHHHHHHSTT  S   SSGGG SSSHHHHHHHHHHHH:    
ExpBur          :beeeebeeeeeeebebebbbbbbebbbbbbbbebbebbebeebeeeeeeeeeeeeeeebeeebeebbeebbebbeeebebbbeebeebbbbbbbbbbbbb:    
Contact         :                                                     bb bb                                          

queryA      4686:FSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFN:4785
                :****************************************************************************************************:
6nur_A_1     319:FSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFN: 418
SecStr          :HGGGS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE S    SBSS  HHHHHHHHT THHHHTTSEE   TT SS EEEES SS     B   EE :    
ExpBur          :bbebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeeeeeeeebbbebbbbebbeeeeebebeebebebebbeeeeeeeeebeeeeeb:    
Contact         :       b b bbbbb     bbbb                          b  bb  b  bbbbbbbbbbbbbbb   b b b bb b b         

queryA      4786:KDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYY:4885
                :****************************************************************************************************:
6nur_A_1     419:KDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYY: 518
SecStr          :HHHHHHHHTTTTT TT S     B   B GGGHHHHHGGGGG       HHHHHHHHHHHHHTTTT       GGG     TTSB  TTGGGT BHHHHH:    
ExpBur          :eebeebbeeeebbeeeeebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbeebbeebebbebebeebebeebeeebbbbbeeeeebeebb:    
Contact         :                                                                                        bb  b    bb 

queryA      4886:DSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVETPHLMG:4985
                :****************************************************************************************************:
6nur_A_1     519:DSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVETPHLMG: 618
SecStr          :TTS HHHHHHHHHHTTTS    EEEEEE    BSS S  EEEE  HHHHHHHHHHHHHHHHHHHT  SSSB  S  STTTHHHHHHHHHHTT SSEEEEE:    
ExpBur          :eebeeeebeebbeebeebbbbbbbbbebeebebeeeebeeebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebebeebbbbebbeebbeebeeeebbb:    
Contact         :bb    b                                                                                             

queryA      4986:WDYPKCDRAMPNMLRIMASLVLARKHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA:5085
                :****************************************************************************************************:
6nur_A_1     619:WDYPKCDRAMPNMLRIMASLVLARKHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA: 718
SecStr          :   TTHHHH  HHHHHHHHHHHGGGTTSS  HHHHHHHHHHHHHHHTS EEEETTEEEE  S   TTSSSHHHHHHHHHHHHHHHHHHHHHHTS GGG S:    
ExpBur          :bebbebebbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbebbebbebbbbbbbbbbbbbbbbbbbbeeeeeebe:    

queryA      5086:DKYVRNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQH:5185
                :****************************************************************************************************:
6nur_A_1     719:DKYVRNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQH: 818
SecStr          : HHHHHHHHHHHTTTSS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS  HHHHHHHHHHHTS    GGG  EE  TTS  S BTTBE:    
ExpBur          :eeebeebbeebeebbbeeeeeeeebbeebeebbeebbbbbbebebbbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebb:    

queryA      5186:TMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYW:5285
                :*******************************************************************************          ***********:
6nur_A_1     819:TMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXMLTNDNTSRYW: 918
SecStr          :EEEEE SSSEEEEEE  HHHHHHHHHEE S SSS HHHHHHHHHHHHHHTGGGGGSS HHHHHHHHHHHHHHHHHHHH ----------   HHHHHGGG:    
ExpBur          :bbebeeeeeebbbbbbebbebbbbbbbbeeebeeeeeebbeebbebbbebbbbeebeeeeebebbebbbebbeebeeee----------ebeeeebeebb:    

queryA      5286:EPE:5288
                :***:
6nur_A_1     919:EPE: 921
SecStr          :S  :    
ExpBur          :eee:

Input Residue Numbers for Focused Sites

ex) 2,15,123