[pdbjlvh2]Protein Model on 5c8t_B

Protein Model on 5c8t_B_1 (TEMPLATE: 5c8t )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(R1AB_SARS)	B 1 (B)	polymer(polypeptide(L)) [514 aa]	Guanine-N7 methyltransferase :R1AB_CVHSA

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5c8t_B_1 identity=97.9%

queryA      5903:AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDA:6002
                :****************************************************************************************************:
5c8t_B_1       2:AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDA: 101
SecStr          :      SS B B  SS   SSS S SSSS GGGEETTEE   TTS   SS  EEE          BTTB  SB  HHHHHHS SSEEEEEEEEEE  SSB:    
ExpBur          :eeeeeeeeeebbeeeebbbeeebeeeeebbeebeeeeeeeeeeeeeeeeebebbbbbeeeeeeeeeeeebebebeeeebbebbbbbbbbbbbbbebeeeb:    

queryA      6003:VGTNLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVK:6102
                :****************************************************************************************************:
5c8t_B_1     102:VGTNLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVK: 201
SecStr          : S EEEEEEEESSS EEE   EEEEE SS EEEEE   B  SSGGGGGGTTHHHH   HHHHHHHHHHHHHHHHTTT SS EEEESS HHHHHHHHHHB :    
ExpBur          :eebebbbbbbbbeeeebbbbbbbbbebeeeeeeeebeeeebeeeeeeebeebbeebeebeebbeebbebbbebbeeebebbbbbbbeeebbbbbbebbbe:    

queryA      6103:IGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG:6202
                :****************************************************************************************************:
5c8t_B_1     202:IGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG: 301
SecStr          :  S  B TTSSSB  EEETTTTEEE TTT  S  EESS EEEEGGGG   S HHHHHHHH  S     SHHHHHHHHHHHHHHHHHSS   TT      S:    
ExpBur          :ebeeeebeebeebbbbbbeeeeeebbbeebeebbbbbbbbbbbbeeeebeeebeebbeeebeeeeeeeebbbbbebbbbbbbeebbeeeeeeeeebeeeb:    

queryA      6203:DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCR:6302
                :****************************************************************************************************:
5c8t_B_1     302:DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCR: 401
SecStr          :SHHHHHHHHHHHHHHHHHHHHHHH  SEEEEES SS   SSSS SSEEEEEESS  STT SS EE    HHHHTTT  SSEEEEES   SS  SSEEEEE:    
ExpBur          :ebeebeebbeebbebbbebbbebeebebbbbbebbebeebbeeeebebebbbeeeeeeeeeebeeeebeeeebeeebeebbbbbbeeebeebbeebbbbb:    

queryA      6303:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRQYLDAYNM:6402
                :*****************************************************           ************************************:
5c8t_B_1     402:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCEXXXXXXXXXXXYVPLKSATCITRCNLGGAVCRHHANEYRQYLDAYNM: 501
SecStr          :E TTS  TTEEE TTS EEE SSS EEE    GGGGTTSEE     B      -----------      SSSB S  SSS   HHHHHHHHHHHHHHHH:    
ExpBur          :bbbeeeeebbbebbeebbbbbbbebeebeebeeebbeebeebebbbbbeeeee-----------eeeeebeebbbbeeeeeeebeebbeebeebeebbeb:    

queryA      6403:MISAGFSLWIYKQFDTYNLWNTFTR:6427
                :*************************:
5c8t_B_1     502:MISAGFSLWIYKQFDTYNLWNTFTR: 526
SecStr          :HHHTTEEEEE TT  SGGGGGGG  :    
ExpBur          :beebbbbbbbbeebeeeebeeeeee:

Protein Model on 5c8t_B_1 (TEMPLATE: 5c8t )

Input Residue Numbers for Focused Sites