Protein Model on 7de1_A_1_B_1 (TEMPLATE: 7de1 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(NCAP_SARS2) A 1 (A) polymer(polypeptide(L)) [108 aa] Nucleoprotein :NCAP_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [115 aa] Nucleoprotein :NCAP_SARS2 259R 260Q 261K 262R 263T 264A 274F 277R 278G 279P 280E 281Q 283Q 284G 285N 286F 296T 301W 304I 305A 306Q 307F 308A 309P 310S 311A 312S 313A 314F 315F 316G 317M 318S 319R 320I 321G 322M 327S 329T 330W 331L 332T 333Y 334T 335G 336A 337I 338K 339L 346F 350V 353L 357I (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7de1_A_1 identity=100.0%
queryA       257:KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKH: 356
                :****************************************************************************************************:
7de1_A_1       8:KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKH: 107
SecStr          :  GGG   BTTB HHHHH    SSTTS  B  HHHHHHGGGSTTHHHHHTTS  HHHHHHHSEEEEEEETTEEEEEEE      TTSTTHHHHHHHHHHH:    
ExpBur          :eeeeeeebeeeebbbebeeebbeeeeeeeebbeebbebbeebeeeeebeebeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeebbeeb:    
Contact         :  bbbbbb         b  bbbbb bbbb         b    b  bbbbbbbbbbbbbbbbbbb    b bbbbbbbbbbb      b   b  b   

queryA       357:IDAYKTFP: 364
                :********:
7de1_A_1     108:IDAYKTFP: 115
SecStr          :BTGGGG  :    
ExpBur          :eebbeeee:    
Contact         :b                                                                                                   


Input Residue Numbers for Focused Sites

ex) 2,15,123